Transcript: lnc-ZSWIM6-6:1

Basic information

LNCipedia transcript ID: lnc-ZSWIM6-6:1 
LNCipedia gene ID: lnc-ZSWIM6-6
Ensembl Gene ID: ENSG00000178722
Ensembl Transcript ID: ENST00000507461
Location (hg38): chr5:61637708-61751763
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 535 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT101677; ENST00000507461.1
Alternative gene names: ENSG00000178722.12; C5orf64


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.8058 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSWIM6-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C5orf64-1:4
4.0 lnc-C5orf64-1:4
4.1 lnc-C5orf64-1:4
5.0 lnc-C5orf64-1:4
5.1 lnc-GAPT-32:1
5.2 lnc-ZSWIM6-6:1