Transcript: lnc-ZSWIM6-6:9

Basic information

LNCipedia transcript ID: lnc-ZSWIM6-6:9 
LNCipedia gene ID: lnc-ZSWIM6-6
Location (hg38): chr5:61750478-61757425
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009980; NONHSAT101694
Alternative gene names: XLOC_004405; linc-KIF2A-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.884 non-coding 
CPAT coding probability 3.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZSWIM6-6:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C5orf64-1:3
3.1 lnc-C5orf64-1:3
4.0 lnc-C5orf64-1:3
4.1 lnc-C5orf64-1:3
5.0 lnc-C5orf64-1:3
5.1 lnc-GAPT-32:9
5.2 lnc-ZSWIM6-6:9