Gene: GATA6-AS1
Basic information
HGNC Gene Symbol:
GATA6-AS1
?
HGNC Full Gene Name:
GATA6 antisense RNA 1 (head to head)
Location (hg38): chr18:22157259-22172110
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 28
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| GATA6-AS1:1 | chr18:22166898-22168968 | 1788 bp |
| GATA6-AS1:10 | chr18:22157259-22169474 | 10679 bp |
| GATA6-AS1:11 | chr18:22157259-22169474 | 7621 bp |
| GATA6-AS1:12 | chr18:22157259-22169474 | 11126 bp |
| GATA6-AS1:13 | chr18:22166893-22169474 | 755 bp |
| GATA6-AS1:14 | chr18:22157259-22169320 | 11136 bp |
| GATA6-AS1:15 | chr18:22157259-22169320 | 11225 bp |
| GATA6-AS1:16 | chr18:22157259-22169320 | 11507 bp |
| GATA6-AS1:17 | chr18:22157259-22169320 | 7969 bp |
| GATA6-AS1:18 | chr18:22157259-22169320 | 8504 bp |
| GATA6-AS1:19 | chr18:22166898-22168903 | 1723 bp |
| GATA6-AS1:2 | chr18:22167255-22168418 | 481 bp |
| GATA6-AS1:20 | chr18:22157259-22168903 | 11093 bp |
| GATA6-AS1:21 | chr18:22166891-22168903 | 1287 bp |
| GATA6-AS1:22 | chr18:22166893-22168903 | 1003 bp |
| GATA6-AS1:23 | chr18:22167393-22168903 | 721 bp |
| GATA6-AS1:24 | chr18:22166794-22168549 | 1364 bp |
| GATA6-AS1:25 | chr18:22166891-22168549 | 857 bp |
| GATA6-AS1:26 | chr18:22167255-22168478 | 541 bp |
| GATA6-AS1:27 | chr18:22167670-22168383 | 207 bp |
| GATA6-AS1:28 | chr18:22162640-22165714 | 3075 bp |
| GATA6-AS1:29 | chr18:22165166-22165679 | 390 bp |
| GATA6-AS1:4 | chr18:22166979-22167942 | 669 bp |
| GATA6-AS1:5 | chr18:22166706-22172110 | 3937 bp |
| GATA6-AS1:6 | chr18:22169456-22171660 | 779 bp |
| GATA6-AS1:7 | chr18:22166891-22169872 | 1514 bp |
| GATA6-AS1:8 | chr18:22166893-22169872 | 1268 bp |
| GATA6-AS1:9 | chr18:22166893-22169872 | 1230 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| GATA6-AS1 | no | no | no | no |
Available literature
- Wang (2016), Epigenetic silencing of tumor suppressor long non-coding RNA BM742401 in chronic lymphocytic leukemia., Oncotarget
- Park (2013), A known expressed sequence tag, BM742401, is a potent lincRNA inhibiting cancer metastasis., Exp. Mol. Med.
- Sigova (2013), Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells., Proc. Natl. Acad. Sci. U.S.A.