Gene: GNAS-AS1

Basic information

LNCipedia gene ID: GNAS-AS1 
Location (hg38): chr20:58811095-58850903
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 16

Transcripts

Transcript IDLocation (hg38)Length
GNAS-AS1:1 chr20:58818919-58850903 1176 bp
GNAS-AS1:12 chr20:58817004-58827808 2401 bp
GNAS-AS1:13 chr20:58817132-58817725 594 bp
GNAS-AS1:14 chr20:58811095-58850878 8847 bp
GNAS-AS1:15 chr20:58811095-58850878 9119 bp
GNAS-AS1:16 chr20:58818793-58850878 1244 bp
GNAS-AS1:17 chr20:58818919-58850878 1131 bp
GNAS-AS1:18 chr20:58824027-58850878 548 bp
GNAS-AS1:2 chr20:58818918-58850903 1157 bp
GNAS-AS1:3 chr20:58841936-58850903 8968 bp
GNAS-AS1:4 chr20:58818919-58850903 1156 bp
GNAS-AS1:5 chr20:58824027-58850878 548 bp
GNAS-AS1:6 chr20:58826114-58840887 907 bp
GNAS-AS1:7 chr20:58839782-58840844 1063 bp
GNAS-AS1:8 chr20:58826736-58840844 2341 bp
GNAS-AS1:9 chr20:58819078-58840175 462 bp


Locus conservation

Locus conservation?
GNAS-AS1 yes no no no

Available literature

  1. Kanduri (2016), Long noncoding RNAs: Lessons from genomic imprinting., Biochim. Biophys. Acta
  2. He (2015), LongTarget: a tool to predict lncRNA DNA-binding motifs and binding sites via Hoogsteen base-pairing analysis., Bioinformatics
  3. Lertampaiporn (2014), Identification of non-coding RNAs with a new composite feature in the Hybrid Random Forest Ensemble algorithm., Nucleic Acids Res.
  4. Takahashi (2014), Extracellular vesicle-mediated transfer of long non-coding RNA ROR modulates chemosensitivity in human hepatocellular cancer., FEBS Open Bio
  5. Kobayashi (2013), Epigenetic and transcriptional features of the novel human imprinted lncRNA GPR1AS suggest it is a functional ortholog to mouse Zdbf2linc., Epigenetics
  6. Chillambhi (2010), Deletion of the noncoding GNAS antisense transcript causes pseudohypoparathyroidism type Ib and biparental defects of GNAS methylation in cis., J. Clin. Endocrinol. Metab.
  7. Zhao (2010), Genome-wide identification of polycomb-associated RNAs by RIP-seq., Mol. Cell
  8. Williamson (2006), Identification of an imprinting control region affecting the expression of all transcripts in the Gnas cluster., Nat. Genet.
  9. Williamson (2002), Alternative non-coding splice variants of Nespas, an imprinted gene antisense to Nesp in the Gnas imprinting cluster., Mamm. Genome
  10. Hayward (2000), An imprinted antisense transcript at the human GNAS1 locus., Hum. Mol. Genet.
  11. Li (2000), Tissue-specific expression of antisense and sense transcripts at the imprinted Gnas locus., Genomics
  12. Wroe (2000), An imprinted transcript, antisense to Nesp, adds complexity to the cluster of imprinted genes at the mouse Gnas locus., Proc. Natl. Acad. Sci. U.S.A.