Gene: PRKCQ-AS1
Basic information
LNCipedia gene ID: PRKCQ-AS1
Location (hg38): chr10:6580399-6639781
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 57
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| PRKCQ-AS1:1 | chr10:6580399-6584285 | 1054 bp |
| PRKCQ-AS1:10 | chr10:6580508-6587101 | 3562 bp |
| PRKCQ-AS1:11 | chr10:6580526-6591068 | 5242 bp |
| PRKCQ-AS1:12 | chr10:6580611-6584144 | 850 bp |
| PRKCQ-AS1:13 | chr10:6583676-6585679 | 365 bp |
| PRKCQ-AS1:14 | chr10:6583679-6584298 | 421 bp |
| PRKCQ-AS1:15 | chr10:6583805-6591097 | 666 bp |
| PRKCQ-AS1:16 | chr10:6583805-6588380 | 661 bp |
| PRKCQ-AS1:17 | chr10:6583805-6615950 | 883 bp |
| PRKCQ-AS1:18 | chr10:6583805-6591132 | 661 bp |
| PRKCQ-AS1:19 | chr10:6583805-6591105 | 401 bp |
| PRKCQ-AS1:2 | chr10:6580399-6585703 | 918 bp |
| PRKCQ-AS1:20 | chr10:6583811-6591134 | 905 bp |
| PRKCQ-AS1:21 | chr10:6583831-6615909 | 767 bp |
| PRKCQ-AS1:22 | chr10:6583831-6615893 | 1132 bp |
| PRKCQ-AS1:23 | chr10:6583831-6615901 | 811 bp |
| PRKCQ-AS1:24 | chr10:6583861-6613903 | 757 bp |
| PRKCQ-AS1:25 | chr10:6586171-6587050 | 880 bp |
| PRKCQ-AS1:26 | chr10:6586224-6586920 | 697 bp |
| PRKCQ-AS1:27 | chr10:6590955-6615848 | 327 bp |
| PRKCQ-AS1:28 | chr10:6590962-6615447 | 300 bp |
| PRKCQ-AS1:29 | chr10:6607287-6615950 | 378 bp |
| PRKCQ-AS1:3 | chr10:6580419-6584299 | 1133 bp |
| PRKCQ-AS1:30 | chr10:6607321-6615959 | 531 bp |
| PRKCQ-AS1:31 | chr10:6608348-6616452 | 938 bp |
| PRKCQ-AS1:32 | chr10:6608376-6616397 | 587 bp |
| PRKCQ-AS1:33 | chr10:6615228-6616780 | 1504 bp |
| PRKCQ-AS1:34 | chr10:6615228-6615835 | 559 bp |
| PRKCQ-AS1:35 | chr10:6615426-6616311 | 680 bp |
| PRKCQ-AS1:36 | chr10:6580419-6584299 | 1133 bp |
| PRKCQ-AS1:37 | chr10:6580419-6622347 | 8613 bp |
| PRKCQ-AS1:38 | chr10:6580419-6622347 | 11636 bp |
| PRKCQ-AS1:39 | chr10:6580419-6584028 | 926 bp |
| PRKCQ-AS1:4 | chr10:6580425-6585361 | 2189 bp |
| PRKCQ-AS1:40 | chr10:6580419-6590426 | 7324 bp |
| PRKCQ-AS1:41 | chr10:6580506-6616829 | 5472 bp |
| PRKCQ-AS1:42 | chr10:6580506-6583731 | 556 bp |
| PRKCQ-AS1:43 | chr10:6580506-6584169 | 781 bp |
| PRKCQ-AS1:44 | chr10:6580506-6588737 | 2931 bp |
| PRKCQ-AS1:45 | chr10:6580506-6626686 | 4682 bp |
| PRKCQ-AS1:46 | chr10:6583657-6584298 | 443 bp |
| PRKCQ-AS1:47 | chr10:6583657-6585679 | 384 bp |
| PRKCQ-AS1:48 | chr10:6583657-6588380 | 809 bp |
| PRKCQ-AS1:49 | chr10:6583657-6591097 | 814 bp |
| PRKCQ-AS1:5 | chr10:6580425-6584028 | 920 bp |
| PRKCQ-AS1:50 | chr10:6618635-6621949 | 638 bp |
| PRKCQ-AS1:51 | chr10:6618716-6625346 | 499 bp |
| PRKCQ-AS1:52 | chr10:6618716-6625346 | 500 bp |
| PRKCQ-AS1:53 | chr10:6618716-6639781 | 3470 bp |
| PRKCQ-AS1:54 | chr10:6620545-6624304 | 1012 bp |
| PRKCQ-AS1:55 | chr10:6621014-6621949 | 400 bp |
| PRKCQ-AS1:56 | chr10:6625941-6627035 | 231 bp |
| PRKCQ-AS1:57 | chr10:6628062-6631020 | 315 bp |
| PRKCQ-AS1:6 | chr10:6580425-6585361 | 2253 bp |
| PRKCQ-AS1:7 | chr10:6580443-6587244 | 3855 bp |
| PRKCQ-AS1:8 | chr10:6580495-6584292 | 915 bp |
| PRKCQ-AS1:9 | chr10:6580508-6587101 | 3825 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| PRKCQ-AS1 | no | no | no | no |
Available literature
- Melo (2016), Long non-coding RNAs: biomarkers for acute leukaemia subtypes., Br. J. Haematol.
- Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.
- Liu (2015), Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis., Biomed Res Int