Transcript: DLEU2:27

Basic information

LNCipedia transcript ID: DLEU2:27 
LNCipedia gene ID: DLEU2
Location (hg38): chr13:49992195-49993991
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 290 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT033781
Alternative gene names: LEU2; TRIM13OS; NCRNA00022; LINC00022; MIR15AHG

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -245.7757 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLEU2:27 no no no no

Available literature

  1. Li (2014), Discovery of Protein-lncRNA Interactions by Integrating Large-Scale CLIP-Seq and RNA-Seq Datasets., Front Bioeng Biotechnol
  2. Niazi (2012), Computational analysis of functional long noncoding RNAs reveals lack of peptide-coding capacity and parallels with 3' UTRs., RNA
  3. Mertens (2000), BCMSUN, a candidate gene for B-cell chronic lymphocytic leukemia and mantle-cell lymphoma, has an independently expressed homolog on 1p22-p31, BCMSUN-like., Int. J. Cancer
  4. Liu (1997), Cloning of two candidate tumor suppressor genes within a 10 kb region on chromosome 13q14, frequently deleted in chronic lymphocytic leukemia., Oncogene

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPRYD7-1:22
4.0 DLEU2:27
4.1 DLEU2:27
5.0 DLEU2:27
5.1 DLEU2:27
5.2 DLEU2:27