Transcript: HCG15:8

Basic information

LNCipedia transcript ID: HCG15:8 
LNCipedia gene ID: HCG15
Location (hg38): chr6:28985694-28986233
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227214.2|FTMT22400002776.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.0222 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HCG15:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C6orf100-3:4
5.0 lnc-C6orf100-3:4
5.1 HCG15:3
5.2 HCG15:8