Transcript: HCG23:15

Basic information

LNCipedia transcript ID: HCG23:15 
LNCipedia gene ID: HCG23
Ensembl Gene ID: ENSG00000225914
Ensembl Transcript ID: ENST00000646550
Location (hg38): chr6:32255721-32390774
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 899 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646550.1
Alternative gene names: ENSG00000225914.2; HCG23


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -16.3587 non-coding 
CPAT coding probability 0.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HCG23:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 HCG23:15
5.1 HCG23:15
5.2 HCG23:15