Transcript: LINC00466:12

Basic information

LNCipedia transcript ID: LINC00466:12 
HGNC Gene Symbol: LINC00466    
HGNC Full Gene Name: long intergenic non-protein coding RNA 466
Ensembl Gene ID: ENSG00000224209
Ensembl Transcript ID: ENST00000447183
Location (hg38): chr1:63159088-63315986
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 785 bp
Exons: 7
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000447183.3
Alternative gene names: ENSG00000224209.7; LINC00466;

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -90.9574 non-coding 
CPAT coding probability 17.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00466:12 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00466:12
4.1 LINC00466:12
5.0 LINC00466:12
5.1 LINC00466:12
5.2 LINC00466:12