Transcript: LINC00466:21

Basic information

LNCipedia transcript ID: LINC00466:21 
LNCipedia gene ID: LINC00466
Location (hg38): chr1:63169689-63317222
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1730 bp
Exons: 9
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224209.2|MICT00000012396.1
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.0473 non-coding 
CPAT coding probability 2.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00466:21 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00466:21
5.0 LINC00466:21
5.1 LINC00466:21
5.2 LINC00466:21