Transcript: LINC00466:3

Basic information

LNCipedia transcript ID: LINC00466:3 
HGNC Gene Symbol: LINC00466    
HGNC Full Gene Name: long intergenic non-protein coding RNA 466
Ensembl Gene ID: ENSG00000224209
Ensembl Transcript ID: ENST00000634725
Location (hg38): chr1:63159090-63317237
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1736 bp
Exons: 11
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634725.1
Alternative gene names: ENSG00000224209.7; LINC00466;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -37.0473 non-coding 
CPAT coding probability 4.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00466:3 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00466:3
4.1 LINC00466:3
5.0 LINC00466:3
5.1 LINC00466:3
5.2 LINC00466:3