Transcript: LINC00466:9

Basic information

LNCipedia transcript ID: LINC00466:9 
HGNC Gene Symbol: LINC00466    
HGNC Full Gene Name: long intergenic non-protein coding RNA 466
Ensembl Gene ID: ENSG00000224209
Ensembl Transcript ID: ENST00000455304
Location (hg38): chr1:63189989-63316087
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1098 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT003658; ENST00000455304.2; ENST00000455304.6
Alternative gene names: ENSG00000224209.2; LINC00466; ENSG00000224209.7;

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.8923 non-coding 
CPAT coding probability 4.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00466:9 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-2:9
4.0 LINC00466:9
4.1 LINC00466:9
5.0 LINC00466:9
5.1 LINC00466:9
5.2 LINC00466:9