Transcript: LINC00467:13

Basic information

LNCipedia transcript ID: LINC00467:13 
LNCipedia gene ID: LINC00467
Location (hg38): chr1:211434896-211435442
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 547 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT009298; FPKM1_group_2228_transcript_2
Alternative gene names: MGC14801

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.8186 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00467:13 no no no no

Available literature

  1. Atmadibrata (2014), The novel long noncoding RNA linc00467 promotes cell survival but is down-regulated by N-Myc., PLoS ONE
  2. Pichler (2014), Long noncoding RNA in neuroblastoma: new light on the (old) N-Myc story., J. Natl. Cancer Inst.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRAF5-2:2
4.0 LINC00467:13
4.1 LINC00467:13
5.0 LINC00467:13
5.1 LINC00467:13
5.2 LINC00467:13