Transcript: LINC01410:3

Basic information

LNCipedia transcript ID: LINC01410:3 
LNCipedia gene ID: LINC01410
Location (hg38): chr9:62802076-62814718
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 457 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000452184; ENST00000452184.1; RP11-262H14.1-002; OTTHUMT00000037072.1; NONHSAT131525
Alternative gene names: ENSG00000238113; RP11-262H14.1; ENSG00000238113.1; OTTHUMG00000013291.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.579 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 1 coding 
orfFrame6.209453366
seqAAMFSWMVLMLVDVLQCLDIKILGMQHHMRSLKNKI
covF1Prop0.15625

In stringent set: no

Locus conservation

Locus conservation?
LINC01410:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-262H14.4.1-1:3
3.1 lnc-RP11-262H14.4.1-1:3
4.0 LINC01410:3
4.1 LINC01410:3
5.0 LINC01410:3
5.1 LINC01410:3
5.2 LINC01410:3