Transcript: LINC01410:4

Basic information

LNCipedia transcript ID: LINC01410:4 
HGNC Gene Symbol: LINC01410    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1410
Ensembl Gene ID: ENSG00000238113
Ensembl Transcript ID: ENST00000452184
Location (hg38): chr9:62802076-62806333
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 314 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT131526; ENST00000452184.2
Alternative gene names: ENSG00000238113.2; RP11-262H14.1; ENSG00000238113.6; LINC01410;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.579 non-coding 
CPAT coding probability 1.01% non-coding 
Bazzini small ORFs 1 coding 
seqAAMFSWMVLMLVDVLQCLDIKILGMQHHMRSLKNKI
covF1Prop0.15625
orfFrame6.209453366

In stringent set: no

Locus conservation

Locus conservation?
LINC01410:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-262H14.4.1-1:4
4.0 LINC01410:4
4.1 LINC01410:4
5.0 LINC01410:4
5.1 LINC01410:4
5.2 LINC01410:4