Transcript: LINC02021:10

Basic information

LNCipedia transcript ID: LINC02021:10 
HGNC Gene Symbol: LINC02021    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2021
Ensembl Gene ID: ENSG00000249846
Ensembl Transcript ID: ENST00000507856
Location (hg38): chr3:130112550-130119430
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 569 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000507856.1; RP11-77P16.4-002; OTTHUMT00000358309.1; NONHSAT092099
Alternative gene names: ENSG00000249846.1; RP11-77P16.4; OTTHUMG00000159926.1; ENSG00000249846.2; ENSG00000249846.6; LINC02021


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.9684 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02021:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRH-1:2
4.0 lnc-TRH-2:5
4.1 lnc-TRH-2:5
5.0 lnc-TRH-2:5
5.1 LINC02021:3
5.2 LINC02021:10