Transcript: NR2F2-AS1:50

Basic information

LNCipedia transcript ID: NR2F2-AS1:50 
LNCipedia gene ID: NR2F2-AS1
Ensembl Gene ID: ENSG00000277135
Ensembl Transcript ID: ENST00000611343
Location (hg38): chr15:96139472-96140452
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 981 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611343.1
Alternative gene names: ENSG00000277135.1; RP11-327J17.9; ; AC012409.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.9847 non-coding 
CPAT coding probability 18.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NR2F2-AS1:50 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC016251.1-26:1
4.1 NR2F2-AS1:50
5.0 NR2F2-AS1:50
5.1 NR2F2-AS1:50
5.2 NR2F2-AS1:50