Transcript: PANTR1:53
Basic information
LNCipedia transcript ID: PANTR1:53
LNCipedia gene ID: PANTR1
Location (hg38): chr2:104807575-104845175
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 646 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005220; NONHSAT072949
Alternative gene names: XLOC_002241; linc-MFSD9-15; linc-Brn1a
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
PANTR1:53 | no | no | no | no |
Available literature
- Li (2014), Increased levels of the long intergenic non-protein coding RNA POU3F3 promote DNA methylation in esophageal squamous cell carcinoma cells., Gastroenterology
- Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife
- Lin (2011), RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders., PLoS ONE
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-TGFBRAP1-5:8 |
3.1 | lnc-TGFBRAP1-6:9 |
4.0 | LINC01158:14 |
4.1 | LINC01158:14 |
5.0 | LINC01158:14 |
5.1 | PANTR1:27 |
5.2 | PANTR1:53 |