Transcript: SNHG16:13
Basic information
LNCipedia transcript ID: SNHG16:13
HGNC Gene Symbol: SNHG16
HGNC Full Gene Name:
small nucleolar RNA host gene 16
Ensembl Gene ID:
ENSG00000163597
Ensembl Transcript ID:
ENST00000448136
Location (hg38): chr17:76557778-76565348
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3607 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT056048; ENST00000448136.1; ENST00000448136.5
Alternative gene names: ENSG00000163597.10; SNHG16; ENSG00000163597.14; ncRAN; Nbla12061; Nbla10727
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| SNHG16:13 | no | no | no | no |
Available literature
- Qi (2015), Down-regulation of ncRAN, a long non-coding RNA, contributes to colorectal cancer cell migration and invasion and predicts poor overall survival for colorectal cancer patients., Mol. Carcinog.
- Hart (2014), MYC regulates the non-coding transcriptome., Oncotarget
- Zhu (2011), ncRAN, a newly identified long noncoding RNA, enhances human bladder tumor growth, invasion, and survival., Urology
- Yu (2009), High expression of ncRAN, a novel non-coding RNA mapped to chromosome 17q25.1, is associated with poor prognosis in neuroblastoma., Int. J. Oncol.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-AC090699.1.1-1:13 |
| 4.0 | SNHG16:13 |
| 4.1 | SNHG16:13 |
| 5.0 | SNHG16:13 |
| 5.1 | SNHG16:13 |
| 5.2 | SNHG16:13 |