Gene: SNHG16
Basic information
LNCipedia gene ID: SNHG16
Location (hg38): chr17:76557764-76792366
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA_gene
Transcripts: 26
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| SNHG16:1 | chr17:76557764-76565348 | 2439 bp |
| SNHG16:10 | chr17:76557770-76565343 | 2424 bp |
| SNHG16:11 | chr17:76557775-76565581 | 2407 bp |
| SNHG16:12 | chr17:76557775-76565279 | 1964 bp |
| SNHG16:13 | chr17:76557778-76565348 | 3607 bp |
| SNHG16:14 | chr17:76557792-76565279 | 1947 bp |
| SNHG16:15 | chr17:76558463-76563753 | 884 bp |
| SNHG16:2 | chr17:76557764-76565348 | 2435 bp |
| SNHG16:3 | chr17:76557764-76565348 | 2538 bp |
| SNHG16:32 | chr17:76557769-76558460 | 580 bp |
| SNHG16:33 | chr17:76557769-76560433 | 2665 bp |
| SNHG16:34 | chr17:76557769-76561751 | 553 bp |
| SNHG16:35 | chr17:76557769-76563160 | 568 bp |
| SNHG16:36 | chr17:76557769-76565343 | 2425 bp |
| SNHG16:37 | chr17:76557769-76565348 | 3616 bp |
| SNHG16:38 | chr17:76557769-76614007 | 1827 bp |
| SNHG16:39 | chr17:76557769-76792366 | 1190 bp |
| SNHG16:4 | chr17:76557764-76565348 | 2534 bp |
| SNHG16:40 | chr17:76557795-76565279 | 1944 bp |
| SNHG16:41 | chr17:76557806-76563753 | 1541 bp |
| SNHG16:42 | chr17:76558796-76562322 | 3140 bp |
| SNHG16:5 | chr17:76557766-76561751 | 556 bp |
| SNHG16:6 | chr17:76557767-76558460 | 582 bp |
| SNHG16:7 | chr17:76557767-76563288 | 473 bp |
| SNHG16:8 | chr17:76557769-76560433 | 2665 bp |
| SNHG16:9 | chr17:76557769-76563160 | 568 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| SNHG16 | no | no | no | no |
Available literature
- Qi (2015), Down-regulation of ncRAN, a long non-coding RNA, contributes to colorectal cancer cell migration and invasion and predicts poor overall survival for colorectal cancer patients., Mol. Carcinog.
- Hart (2014), MYC regulates the non-coding transcriptome., Oncotarget
- Zhu (2011), ncRAN, a newly identified long noncoding RNA, enhances human bladder tumor growth, invasion, and survival., Urology
- Yu (2009), High expression of ncRAN, a novel non-coding RNA mapped to chromosome 17q25.1, is associated with poor prognosis in neuroblastoma., Int. J. Oncol.