Transcript: THUMPD3-AS1:27

Basic information

LNCipedia transcript ID: THUMPD3-AS1:27 
LNCipedia gene ID: THUMPD3-AS1
Location (hg38): chr3:9390275-9395625
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1672 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087782
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.2616 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THUMPD3-AS1:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SRGAP3-1:35
4.0 THUMPD3-AS1:27
4.1 THUMPD3-AS1:27
5.0 THUMPD3-AS1:27
5.1 THUMPD3-AS1:27
5.2 THUMPD3-AS1:27