Transcript: THUMPD3-AS1:29

Basic information

LNCipedia transcript ID: THUMPD3-AS1:29 
LNCipedia gene ID: THUMPD3-AS1
Location (hg38): chr3:9388846-9391833
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2988 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA996:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.2616 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THUMPD3-AS1:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 THUMPD3-AS1:29
4.1 THUMPD3-AS1:29
5.0 THUMPD3-AS1:29
5.1 THUMPD3-AS1:29
5.2 THUMPD3-AS1:29