Transcript: THUMPD3-AS1:44

Basic information

LNCipedia transcript ID: THUMPD3-AS1:44 
LNCipedia gene ID: THUMPD3-AS1
Location (hg38): chr3:9391347-9398755
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 937 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000206573.4|ENST00000521708.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.1099 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THUMPD3-AS1:44 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 THUMPD3-AS1:44
5.0 THUMPD3-AS1:44
5.1 THUMPD3-AS1:44
5.2 THUMPD3-AS1:44