Transcript: lnc-NYAP2-5:1

Basic information

LNCipedia transcript ID: lnc-NYAP2-5:1 
LNCipedia gene ID: lnc-NYAP2-5
RefSeq ID: NR_046102
Location (hg38): chr2:226142794-226180062
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 935 bp
Exons: 7
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT077183; NR_046102; NR_046102.1
Alternative gene names: LOC646736


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -221.5622 non-coding 
CPAT coding probability 29.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NYAP2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NYAP2-5:1
4.0 lnc-NYAP2-5:1
4.1 lnc-NYAP2-5:1
5.0 lnc-NYAP2-5:1
5.1 lnc-MOGAT1-65:1
5.2 lnc-NYAP2-5:1