Transcript: lnc-NYAP2-5:5

Basic information

LNCipedia transcript ID: lnc-NYAP2-5:5 
LNCipedia gene ID: lnc-NYAP2-5
Location (hg38): chr2:226172534-226173101
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 568 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000046908.1|FTMT20800013681.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -329.9378 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NYAP2-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NYAP2-5:5
5.0 lnc-NYAP2-5:5
5.1 lnc-MOGAT1-65:5
5.2 lnc-NYAP2-5:5