Basic information

LNCipedia gene ID: FIRRE ?
Location (hg19): chrX:130823765-130964671
Strand: -
Transcripts: 21


Transcript IDLocation (hg19)Length
FIRRE:1 chrX:130836678-130964671 2928 bp
FIRRE:10 chrX:130889639-130964632 1398 bp
FIRRE:11 chrX:130835417-130964632 3948 bp
FIRRE:12 chrX:130835417-130964632 8415 bp
FIRRE:13 chrX:130845758-130964632 1568 bp
FIRRE:14 chrX:130918530-130964632 3185 bp
FIRRE:15 chrX:130836678-130964632 2889 bp
FIRRE:16 chrX:130883430-130928495 381 bp
FIRRE:17 chrX:130883332-130928495 628 bp
FIRRE:18 chrX:130889599-130928495 853 bp
FIRRE:19 chrX:130895963-130928495 515 bp
FIRRE:2 chrX:130845679-130964671 1662 bp
FIRRE:20 chrX:130883378-130928495 429 bp
FIRRE:21 chrX:130825558-130889694 1635 bp
FIRRE:3 chrX:130928299-130964671 2625 bp
FIRRE:4 chrX:130929685-130930195 511 bp
FIRRE:5 chrX:130890639-130919294 510 bp
FIRRE:6 chrX:130902595-130918043 259 bp
FIRRE:7 chrX:130823765-130889773 3137 bp
FIRRE:8 chrX:130877137-130889771 439 bp
FIRRE:9 chrX:130823930-130826881 524 bp

Locus conservation

Locus conservation?
FIRRE no no

Available literature

  1. Hacisuleyman (2016), Function and evolution of local repeats in the Firre locus., Nature communications
  2. Chapman (2015), Differentially methylated CpG island within human XIST mediates alternative P2 transcription and YY1 binding., BMC genetics
  3. Qiu (2015), Long non-coding RNA LINC01296 is a potential prognostic biomarker in patients with colorectal cancer., Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine
  4. Yang (2015), The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation., Genome biology
  5. Hacisuleyman (2014), Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre., Nature structural & molecular biology
  6. Luco (2014), The non-coding genome: a universe in expansion for fine-tuning the coding world., Genome biology