Gene: FTX
Basic information
LNCipedia gene ID: FTX
Location (hg38): chrX:73946555-74293574
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 57
Transcripts
Transcript ID | Location (hg38) | Length |
---|---|---|
FTX:1 | chrX:74028136-74293574 | 1639 bp |
FTX:10 | chrX:74274342-74292595 | 574 bp |
FTX:11 | chrX:74274356-74292529 | 561 bp |
FTX:12 | chrX:74280401-74292351 | 579 bp |
FTX:13 | chrX:73963955-74292342 | 1077 bp |
FTX:14 | chrX:74280461-74292075 | 654 bp |
FTX:15 | chrX:74281705-74284862 | 264 bp |
FTX:16 | chrX:74242610-74242901 | 292 bp |
FTX:17 | chrX:74200229-74242148 | 3897 bp |
FTX:18 | chrX:74196350-74225089 | 28740 bp |
FTX:19 | chrX:74209976-74213660 | 3685 bp |
FTX:2 | chrX:74028136-74293574 | 2356 bp |
FTX:20 | chrX:74164589-74210252 | 708 bp |
FTX:21 | chrX:74195099-74209325 | 2597 bp |
FTX:22 | chrX:74197126-74209076 | 579 bp |
FTX:23 | chrX:74197186-74208800 | 654 bp |
FTX:24 | chrX:74205202-74208176 | 2975 bp |
FTX:25 | chrX:74198430-74201587 | 264 bp |
FTX:26 | chrX:74028136-74293530 | 2312 bp |
FTX:27 | chrX:74069358-74293530 | 809 bp |
FTX:28 | chrX:74215562-74293530 | 47120 bp |
FTX:29 | chrX:74215562-74293530 | 9798 bp |
FTX:3 | chrX:74217066-74293551 | 37513 bp |
FTX:30 | chrX:74215562-74293530 | 59239 bp |
FTX:31 | chrX:74247864-74293530 | 711 bp |
FTX:32 | chrX:74271315-74293530 | 9661 bp |
FTX:33 | chrX:74280931-74293530 | 687 bp |
FTX:34 | chrX:74209039-74292583 | 10346 bp |
FTX:35 | chrX:74215562-74292583 | 65392 bp |
FTX:36 | chrX:74215562-74292583 | 61239 bp |
FTX:37 | chrX:74271315-74292583 | 9639 bp |
FTX:38 | chrX:74274342-74292583 | 562 bp |
FTX:39 | chrX:74278374-74292583 | 2580 bp |
FTX:4 | chrX:74201669-74293542 | 7047 bp |
FTX:40 | chrX:74215562-74292529 | 65596 bp |
FTX:41 | chrX:74274356-74292529 | 561 bp |
FTX:42 | chrX:73963955-74292351 | 1086 bp |
FTX:43 | chrX:74215562-74292351 | 59435 bp |
FTX:44 | chrX:74276141-74292351 | 5250 bp |
FTX:45 | chrX:74280401-74292351 | 579 bp |
FTX:46 | chrX:74290405-74292064 | 333 bp |
FTX:47 | chrX:74209039-74292064 | 10496 bp |
FTX:48 | chrX:74209039-74292064 | 10479 bp |
FTX:49 | chrX:74280461-74292064 | 643 bp |
FTX:5 | chrX:74280931-74293539 | 696 bp |
FTX:50 | chrX:74196351-74293574 | 8347 bp |
FTX:51 | chrX:74130309-74292594 | 1367 bp |
FTX:52 | chrX:73998242-74292583 | 9771 bp |
FTX:53 | chrX:73981896-74012945 | 11246 bp |
FTX:54 | chrX:73946555-74012945 | 12267 bp |
FTX:55 | chrX:73998242-74012945 | 11469 bp |
FTX:58 | chrX:74009389-74011468 | 905 bp |
FTX:59 | chrX:73947245-74005408 | 1269 bp |
FTX:6 | chrX:74247864-74293527 | 708 bp |
FTX:7 | chrX:74069358-74293472 | 751 bp |
FTX:8 | chrX:74291693-74292621 | 217 bp |
FTX:9 | chrX:74278374-74292600 | 2597 bp |
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
FTX | no | no | no | no |
Available literature
- Caudron-Herger (2015), Dissecting the nascent human transcriptome by analysing the RNA content of transcription factories., Nucleic Acids Res.
- Guo (2015), Biological significance of long non-coding RNA FTX expression in human colorectal cancer., Int J Clin Exp Med
- Reiche (2014), Long non-coding RNAs differentially expressed between normal versus primary breast tumor tissues disclose converse changes to breast cancer-related protein-coding genes., PLoS ONE
- Soma (2014), Ftx is dispensable for imprinted X-chromosome inactivation in preimplantation mouse embryos., Sci Rep
- Yoon (2014), PAR-CLIP analysis uncovers AUF1 impact on target RNA fate and genome integrity., Nat Commun
- Zhao (2014), The miR-545/374a cluster encoded in the Ftx lncRNA is overexpressed in HBV-related hepatocellular carcinoma and promotes tumorigenesis and tumor progression., PLoS ONE
- Chureau (2011), Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region., Hum. Mol. Genet.
- Payer (2011), X-inactivation and X-reactivation: epigenetic hallmarks of mammalian reproduction and pluripotent stem cells., Hum. Genet.
- Kolesnikov (2010), [Comparative organization and the origin of noncoding regulatory RNA genes from X-chromosome inactivation center of human and mouse]., Genetika
- Chureau (2002), Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine., Genome Res.