Gene: GAPLINC
Basic information
LNCipedia gene ID: GAPLINC
Location (hg38): chr18:3466250-3486921
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 17
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| GAPLINC:1 | chr18:3466250-3478927 | 450 bp |
| GAPLINC:10 | chr18:3467241-3478976 | 440 bp |
| GAPLINC:11 | chr18:3474041-3478976 | 323 bp |
| GAPLINC:12 | chr18:3466308-3478927 | 392 bp |
| GAPLINC:13 | chr18:3466308-3486921 | 246 bp |
| GAPLINC:14 | chr18:3466308-3467898 | 1591 bp |
| GAPLINC:15 | chr18:3466308-3473203 | 555 bp |
| GAPLINC:16 | chr18:3466308-3478976 | 1373 bp |
| GAPLINC:17 | chr18:3466308-3478978 | 632 bp |
| GAPLINC:2 | chr18:3466250-3473203 | 613 bp |
| GAPLINC:3 | chr18:3466250-3478978 | 475 bp |
| GAPLINC:4 | chr18:3466250-3478978 | 501 bp |
| GAPLINC:5 | chr18:3466273-3478941 | 441 bp |
| GAPLINC:6 | chr18:3466273-3478941 | 348 bp |
| GAPLINC:7 | chr18:3466292-3478976 | 457 bp |
| GAPLINC:8 | chr18:3466297-3478978 | 643 bp |
| GAPLINC:9 | chr18:3466308-3478941 | 380 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| GAPLINC | no | no | no | no |
Available literature
- Liu (2016), Hypoxia Promotes Gastric Cancer Malignancy Partly through the HIF-1α Dependent Transcriptional Activation of the Long Non-coding RNA GAPLINC., Front Physiol
- Wu (2016), Long Non-Coding RNA ucoo2kmd.1 Regulates CD44-Dependent Cell Growth by Competing for miR-211-3p in Colorectal Cancer., PLoS ONE
- Huang (2015), Long non-coding RNA TUG1 is up-regulated in hepatocellular carcinoma and promotes cell growth and apoptosis by epigenetically silencing of KLF2., Mol. Cancer
- Xie (2015), Decreased long noncoding RNA SPRY4-IT1 contributing to gastric cancer cell metastasis partly via affecting epithelial-mesenchymal transition., J Transl Med
- Xie (2015), Long noncoding RNA HOXA-AS2 promotes gastric cancer proliferation by epigenetically silencing P21/PLK3/DDIT3 expression., Oncotarget
- Hu (2014), Long noncoding RNA GAPLINC regulates CD44-dependent cell invasiveness and associates with poor prognosis of gastric cancer., Cancer Res.