Gene: HOTAIRM1

Basic information

HGNC Gene Symbol: HOTAIRM1  ?
HGNC Full Gene Name: HOXA transcript antisense RNA, myeloid-specific 1
Location (hg38): chr7:27096080-27100265
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 11

Transcripts

Transcript IDLocation (hg38)Length
HOTAIRM1:10 chr7:27096112-27100154 653 bp
HOTAIRM1:13 chr7:27096112-27099966 734 bp
HOTAIRM1:15 chr7:27096170-27099966 700 bp
HOTAIRM1:2 chr7:27096080-27100258 789 bp
HOTAIRM1:3 chr7:27096094-27100154 671 bp
HOTAIRM1:4 chr7:27096094-27100258 1044 bp
HOTAIRM1:5 chr7:27096094-27100258 775 bp
HOTAIRM1:6 chr7:27096124-27099966 722 bp
HOTAIRM1:7 chr7:27096233-27099966 637 bp
HOTAIRM1:8 chr7:27098839-27100139 889 bp
HOTAIRM1:9 chr7:27099619-27100265 647 bp


Locus conservation

Locus conservation?
HOTAIRM1 no no no no

Available literature

  1. Zhou (2016), Microarray expression profile analysis of long non-coding RNAs in pancreatic ductal adenocarcinoma., Int. J. Oncol.
  2. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.
  3. Carpenter (2015), Editorial: Functions of Non-Coding RNA in Innate Immunity., Front Immunol
  4. Chen (2015), Differential lncRNA expression profiles in recurrent gliomas compared with primary gliomas identified by microarray analysis., Int J Clin Exp Med
  5. Díaz-Beyá (2015), The lincRNA HOTAIRM1, located in the HOXA genomic region, is expressed in acute myeloid leukemia, impacts prognosis in patients in the intermediate-risk cytogenetic category, and is associated with a distinctive microRNA signature., Oncotarget
  6. Hao (2015), HOTAIR is upregulated in acute myeloid leukemia and that indicates a poor prognosis., Int J Clin Exp Pathol
  7. Imam (2015), The lncRNA NRON modulates HIV-1 replication in a NFAT-dependent manner and is differentially regulated by early and late viral proteins., Sci Rep
  8. Jiang (2015), Long non-coding RNA profiling links subgroup classification of endometrioid endometrial carcinomas with trithorax and polycomb complex aberrations., Oncotarget
  9. Pastori (2015), The Bromodomain protein BRD4 controls HOTAIR, a long noncoding RNA essential for glioblastoma proliferation., Proc. Natl. Acad. Sci. U.S.A.
  10. Zhu (2015), Microarray analysis of Long non-coding RNA expression profiles in human gastric cells and tissues with Helicobacter pylori Infection., BMC Med Genomics
  11. Atianand (2014), Long non-coding RNAs and control of gene expression in the immune system., Trends Mol Med
  12. Lertampaiporn (2014), Identification of non-coding RNAs with a new composite feature in the Hybrid Random Forest Ensemble algorithm., Nucleic Acids Res.
  13. Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget
  14. Zhang (2014), Long intergenic non-coding RNA HOTAIRM1 regulates cell cycle progression during myeloid maturation in NB4 human promyelocytic leukemia cells., RNA Biol
  15. Garding (2013), Epigenetic upregulation of lncRNAs at 13q14.3 in leukemia is linked to the In Cis downregulation of a gene cluster that targets NF-kB., PLoS Genet.
  16. Kapusta (2013), Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs., PLoS Genet.
  17. Kim (2013), HOTAIR is a negative prognostic factor and exhibits pro-oncogenic activity in pancreatic cancer., Oncogene
  18. Wan (2013), Long non-coding RNA ANRIL (CDKN2B-AS) is induced by the ATM-E2F1 signaling pathway., Cell. Signal.
  19. Zhao (2013), HOX antisense lincRNA HOXA-AS2 is an apoptosis repressor in all trans retinoic acid treated NB4 promyelocytic leukemia cells., J. Cell. Biochem.
  20. Nam (2012), Long noncoding RNAs in C. elegans., Genome Res.
  21. Lin (2011), RNA-Seq of human neurons derived from iPS cells reveals candidate long non-coding RNAs involved in neurogenesis and neuropsychiatric disorders., PLoS ONE
  22. Zhang (2009), A myelopoiesis-associated regulatory intergenic noncoding RNA transcript within the human HOXA cluster., Blood