Gene: LINC00472
Basic information
LNCipedia gene ID: LINC00472
Location (hg38): chr6:71187574-71477490
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 70
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| LINC00472:1 | chr6:71418692-71420819 | 817 bp |
| LINC00472:10 | chr6:71373502-71420269 | 12222 bp |
| LINC00472:11 | chr6:71416384-71420267 | 451 bp |
| LINC00472:12 | chr6:71416477-71420267 | 475 bp |
| LINC00472:13 | chr6:71344586-71420266 | 667 bp |
| LINC00472:14 | chr6:71416163-71420261 | 717 bp |
| LINC00472:15 | chr6:71344344-71420103 | 662 bp |
| LINC00472:16 | chr6:71416050-71417458 | 649 bp |
| LINC00472:17 | chr6:71295173-71417436 | 732 bp |
| LINC00472:18 | chr6:71408208-71417330 | 2207 bp |
| LINC00472:19 | chr6:71373253-71375387 | 2125 bp |
| LINC00472:2 | chr6:71414251-71420803 | 3171 bp |
| LINC00472:20 | chr6:71373244-71374992 | 1749 bp |
| LINC00472:21 | chr6:71343501-71346206 | 1226 bp |
| LINC00472:22 | chr6:71308126-71328228 | 808 bp |
| LINC00472:23 | chr6:71302740-71328218 | 718 bp |
| LINC00472:24 | chr6:71307855-71328218 | 749 bp |
| LINC00472:25 | chr6:71308002-71328217 | 946 bp |
| LINC00472:26 | chr6:71310313-71328111 | 288 bp |
| LINC00472:27 | chr6:71302842-71328084 | 525 bp |
| LINC00472:28 | chr6:71307941-71328084 | 529 bp |
| LINC00472:29 | chr6:71251562-71328063 | 704 bp |
| LINC00472:3 | chr6:71414446-71420769 | 2957 bp |
| LINC00472:30 | chr6:71253684-71328063 | 798 bp |
| LINC00472:31 | chr6:71277219-71328063 | 750 bp |
| LINC00472:32 | chr6:71281385-71328063 | 766 bp |
| LINC00472:33 | chr6:71295176-71328063 | 651 bp |
| LINC00472:34 | chr6:71302966-71328063 | 750 bp |
| LINC00472:35 | chr6:71302970-71328063 | 469 bp |
| LINC00472:36 | chr6:71307941-71328063 | 680 bp |
| LINC00472:37 | chr6:71310296-71328063 | 656 bp |
| LINC00472:38 | chr6:71295545-71328063 | 645 bp |
| LINC00472:39 | chr6:71302978-71328059 | 655 bp |
| LINC00472:4 | chr6:71414445-71420769 | 2958 bp |
| LINC00472:40 | chr6:71307945-71328058 | 578 bp |
| LINC00472:41 | chr6:71303897-71328057 | 745 bp |
| LINC00472:42 | chr6:71307981-71328053 | 634 bp |
| LINC00472:43 | chr6:71308026-71311648 | 605 bp |
| LINC00472:44 | chr6:71295173-71310595 | 418 bp |
| LINC00472:45 | chr6:71251358-71310576 | 465 bp |
| LINC00472:46 | chr6:71251364-71310340 | 407 bp |
| LINC00472:47 | chr6:71221457-71284932 | 488 bp |
| LINC00472:48 | chr6:71229826-71238598 | 393 bp |
| LINC00472:49 | chr6:71187574-71233663 | 228 bp |
| LINC00472:5 | chr6:71414446-71420745 | 2933 bp |
| LINC00472:50 | chr6:71471167-71477490 | 2957 bp |
| LINC00472:51 | chr6:71471167-71477466 | 2933 bp |
| LINC00472:52 | chr6:71473105-71476988 | 451 bp |
| LINC00472:53 | chr6:71473198-71476988 | 475 bp |
| LINC00472:54 | chr6:71401307-71476987 | 667 bp |
| LINC00472:55 | chr6:71401065-71476824 | 662 bp |
| LINC00472:56 | chr6:71382351-71420829 | 35028 bp |
| LINC00472:57 | chr6:71382351-71420829 | 2703 bp |
| LINC00472:58 | chr6:71414445-71420829 | 3018 bp |
| LINC00472:59 | chr6:71373080-71420165 | 343 bp |
| LINC00472:6 | chr6:71407864-71420745 | 9515 bp |
| LINC00472:60 | chr6:71416384-71420165 | 349 bp |
| LINC00472:61 | chr6:71416477-71420165 | 373 bp |
| LINC00472:62 | chr6:71407034-71420165 | 9626 bp |
| LINC00472:63 | chr6:71344344-71420165 | 724 bp |
| LINC00472:64 | chr6:71344586-71420165 | 566 bp |
| LINC00472:65 | chr6:71383129-71420165 | 1261 bp |
| LINC00472:66 | chr6:71401477-71420165 | 15256 bp |
| LINC00472:67 | chr6:71407918-71420165 | 8881 bp |
| LINC00472:68 | chr6:71416163-71420165 | 621 bp |
| LINC00472:69 | chr6:71403253-71416009 | 12646 bp |
| LINC00472:7 | chr6:71407864-71420745 | 9566 bp |
| LINC00472:70 | chr6:71249904-71288722 | 2138 bp |
| LINC00472:8 | chr6:71407864-71420745 | 9500 bp |
| LINC00472:9 | chr6:71407864-71420745 | 9449 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| LINC00472 | no | no | no | no |
Available literature
- Permuth (2017), Linc-ing Circulating Long Non-coding RNAs to the Diagnosis and Malignant Prediction of Intraductal Papillary Mucinous Neoplasms of the Pancreas., Sci Rep
- Fu (2016), Long non-coding RNAs, ASAP1-IT1, FAM215A, and LINC00472, in epithelial ovarian cancer., Gynecol. Oncol.
- Dhir (2015), Microprocessor mediates transcriptional termination of long noncoding RNA transcripts hosting microRNAs., Nat. Struct. Mol. Biol.
- Shen (2015), Prognostic and predictive values of long non-coding RNA LINC00472 in breast cancer., Oncotarget