Gene: ZFAS1

Basic information

LNCipedia gene ID: ZFAS1 
Location (hg38): chr20:49276739-49361131
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 30


Transcript IDLocation (hg38)Length
ZFAS1:1 chr20:49278178-49289260 946 bp
ZFAS1:10 chr20:49278584-49289262 604 bp
ZFAS1:11 chr20:49278584-49289262 542 bp
ZFAS1:12 chr20:49278642-49289260 504 bp
ZFAS1:13 chr20:49278642-49289260 566 bp
ZFAS1:14 chr20:49278642-49289256 767 bp
ZFAS1:15 chr20:49278642-49289258 502 bp
ZFAS1:16 chr20:49278654-49295594 508 bp
ZFAS1:17 chr20:49279174-49281181 732 bp
ZFAS1:18 chr20:49290888-49295738 597 bp
ZFAS1:19 chr20:49276739-49295727 533 bp
ZFAS1:2 chr20:49278178-49289260 1075 bp
ZFAS1:20 chr20:49276739-49295727 681 bp
ZFAS1:21 chr20:49278642-49289260 396 bp
ZFAS1:22 chr20:49278642-49361131 276 bp
ZFAS1:24 chr20:49278642-49289260 504 bp
ZFAS1:25 chr20:49278642-49289260 544 bp
ZFAS1:26 chr20:49278642-49289260 566 bp
ZFAS1:27 chr20:49278642-49289260 482 bp
ZFAS1:28 chr20:49278642-49289260 611 bp
ZFAS1:29 chr20:49280508-49287624 847 bp
ZFAS1:3 chr20:49278178-49289260 860 bp
ZFAS1:30 chr20:49280508-49289068 1003 bp
ZFAS1:31 chr20:49278178-49289260 689 bp
ZFAS1:4 chr20:49278178-49289260 1008 bp
ZFAS1:5 chr20:49278178-49289258 687 bp
ZFAS1:6 chr20:49278178-49289258 944 bp
ZFAS1:7 chr20:49278178-49289258 858 bp
ZFAS1:8 chr20:49278178-49289258 1006 bp
ZFAS1:9 chr20:49278271-49289260 596 bp

Locus conservation

Locus conservation?
ZFAS1 yes no no no

Available literature

  1. Thorenoor (2016), Long non-coding RNA ZFAS1 interacts with CDK1 and is involved in p53-dependent cell cycle control and apoptosis in colorectal cancer., Oncotarget
  2. Zhang (2016), Long non-coding RNA chromogenic in situ hybridisation signal pattern correlation with breast tumour pathology., J. Clin. Pathol.
  3. Imam (2015), The lncRNA NRON modulates HIV-1 replication in a NFAT-dependent manner and is differentially regulated by early and late viral proteins., Sci Rep
  4. Na (2015), Long non-coding RNA UCA1 contributes to the progression of prostate cancer and regulates proliferation through KLF4-KRT6/13 signaling pathway., Int J Clin Exp Med
  5. Pei (2015), Notch-1 promotes breast cancer cells proliferation by regulating LncRNA GAS5., Int J Clin Exp Med
  6. Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget
  7. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.
  8. Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome Res.
  9. Askarian-Amiri (2011), SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer., RNA
  10. Friedel (2009), Conserved principles of mammalian transcriptional regulation revealed by RNA half-life., Nucleic Acids Res.
  11. Sharova (2009), Database for mRNA half-life of 19 977 genes obtained by DNA microarray analysis of pluripotent and differentiating mouse embryonic stem cells., DNA Res.