Gene: SNHG1

Basic information

LNCipedia gene ID: SNHG1 ?
Location (hg19): chr11:62619346-62623483
Strand: -
Transcripts: 64


Transcript IDLocation (hg19)Length
SNHG1:1 chr11:62619410-62623483 3284 bp
SNHG1:10 chr11:62619460-62623339 1487 bp
SNHG1:11 chr11:62621552-62623284 996 bp
SNHG1:12 chr11:62622154-62623230 870 bp
SNHG1:13 chr11:62619460-62623218 1374 bp
SNHG1:14 chr11:62619762-62622960 748 bp
SNHG1:15 chr11:62621914-62622960 646 bp
SNHG1:16 chr11:62619769-62622960 588 bp
SNHG1:17 chr11:62622152-62622960 594 bp
SNHG1:18 chr11:62619724-62622960 754 bp
SNHG1:19 chr11:62621840-62622960 578 bp
SNHG1:2 chr11:62619730-62623386 780 bp
SNHG1:20 chr11:62620304-62622960 636 bp
SNHG1:21 chr11:62620545-62622960 784 bp
SNHG1:22 chr11:62620826-62622960 550 bp
SNHG1:23 chr11:62621019-62622951 532 bp
SNHG1:24 chr11:62620081-62622939 347 bp
SNHG1:25 chr11:62619461-62622938 2001 bp
SNHG1:26 chr11:62620221-62622932 610 bp
SNHG1:27 chr11:62619463-62622932 1038 bp
SNHG1:28 chr11:62619460-62622708 1071 bp
SNHG1:29 chr11:62619492-62622708 955 bp
SNHG1:3 chr11:62619460-62623360 1118 bp
SNHG1:30 chr11:62621045-62622646 240 bp
SNHG1:31 chr11:62620544-62621814 625 bp
SNHG1:32 chr11:62619520-62621168 849 bp
SNHG1:33 chr11:62619346-62623357 2740 bp
SNHG1:34 chr11:62619346-62623357 2463 bp
SNHG1:35 chr11:62619458-62623357 1066 bp
SNHG1:36 chr11:62619460-62623357 633 bp
SNHG1:37 chr11:62619460-62623357 1505 bp
SNHG1:38 chr11:62619460-62623357 1513 bp
SNHG1:39 chr11:62619730-62623357 751 bp
SNHG1:4 chr11:62619461-62623357 2768 bp
SNHG1:40 chr11:62622154-62623357 997 bp
SNHG1:41 chr11:62623040-62623357 318 bp
SNHG1:42 chr11:62619346-62623357 3253 bp
SNHG1:43 chr11:62619346-62623357 2503 bp
SNHG1:44 chr11:62619461-62623357 2768 bp
SNHG1:45 chr11:62621552-62623357 1069 bp
SNHG1:46 chr11:62619769-62622945 573 bp
SNHG1:47 chr11:62619460-62622945 1308 bp
SNHG1:48 chr11:62619463-62622945 1051 bp
SNHG1:49 chr11:62619492-62622945 1192 bp
SNHG1:5 chr11:62619460-62623353 629 bp
SNHG1:50 chr11:62619724-62622945 739 bp
SNHG1:51 chr11:62619762-62622945 733 bp
SNHG1:52 chr11:62620081-62622945 353 bp
SNHG1:53 chr11:62620221-62622945 623 bp
SNHG1:54 chr11:62620304-62622945 621 bp
SNHG1:55 chr11:62620826-62622945 535 bp
SNHG1:56 chr11:62622152-62622945 579 bp
SNHG1:57 chr11:62620545-62622945 769 bp
SNHG1:58 chr11:62621019-62622945 526 bp
SNHG1:59 chr11:62621045-62622945 539 bp
SNHG1:6 chr11:62619460-62623346 1404 bp
SNHG1:60 chr11:62621840-62622945 563 bp
SNHG1:61 chr11:62621914-62622945 631 bp
SNHG1:62 chr11:62620339-62622165 979 bp
SNHG1:63 chr11:62620544-62621435 246 bp
SNHG1:64 chr11:62619520-62621435 1116 bp
SNHG1:7 chr11:62619460-62623346 1455 bp
SNHG1:8 chr11:62619460-62623346 1502 bp
SNHG1:9 chr11:62619460-62623346 1451 bp

Locus conservation

Locus conservation?
SNHG1 no no

Available literature

  1. Ichigozaki (2016), Serum long non-coding RNA, snoRNA host gene 5 level as a new tumor marker of malignant melanoma., Experimental dermatology
  2. Li (2015), Discovery of Protein-lncRNA Interactions by Integrating Large-Scale CLIP-Seq and RNA-Seq Datasets., Frontiers in bioengineering and biotechnology
  3. You (2015), Noncoding RNA small nucleolar RNA host gene 1 promote cell proliferation in nonsmall cell lung cancer., Indian journal of cancer
  4. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PloS one
  5. Zhi (2015), The Use of Three Long Non-Coding RNAs as Potential Prognostic Indicators of Astrocytoma., PloS one
  6. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World journal of gastroenterology
  7. Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome research
  8. Mizutani (2012), Identification and characterization of novel genotoxic stress-inducible nuclear long noncoding RNAs in mammalian cells., PloS one
  9. Mercer (2010), Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation., BMC neuroscience
  10. Friedel (2009), Conserved principles of mammalian transcriptional regulation revealed by RNA half-life., Nucleic acids research
  11. Tanaka-Fujita (2007), Human and mouse protein-noncoding snoRNA host genes with dissimilar nucleotide sequences show chromosomal synteny., RNA (New York, N.Y.)
  12. Pelczar (1998), The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene family., Molecular and cellular biology
  13. Tycowski (1996), A mammalian gene with introns instead of exons generating stable RNA products., Nature