Gene: lnc-SLC39A11-10

Basic information

HGNC Gene Symbol: SOX9-AS1  ?
HGNC Full Gene Name: SOX9 antisense RNA 1
Location (hg38): chr17:72021851-72237203
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA_gene
Transcripts: 54

Transcripts

Transcript IDLocation (hg38)Length
lnc-SLC39A11-10:1 chr17:72219946-72237203 1563 bp
lnc-SLC39A11-10:10 chr17:72079938-72120793 1739 bp
lnc-SLC39A11-10:11 chr17:72070864-72120792 3386 bp
lnc-SLC39A11-10:12 chr17:72070864-72120792 840 bp
lnc-SLC39A11-10:13 chr17:72079938-72120792 1738 bp
lnc-SLC39A11-10:14 chr17:72080963-72120792 769 bp
lnc-SLC39A11-10:15 chr17:72071055-72120788 447 bp
lnc-SLC39A11-10:16 chr17:72076114-72120777 961 bp
lnc-SLC39A11-10:17 chr17:72070864-72119547 2987 bp
lnc-SLC39A11-10:18 chr17:72070864-72119547 3057 bp
lnc-SLC39A11-10:19 chr17:72071042-72119547 394 bp
lnc-SLC39A11-10:2 chr17:72221130-72221836 465 bp
lnc-SLC39A11-10:20 chr17:72071043-72119547 567 bp
lnc-SLC39A11-10:21 chr17:72080963-72119547 873 bp
lnc-SLC39A11-10:22 chr17:72090755-72119547 484 bp
lnc-SLC39A11-10:23 chr17:72090755-72119523 460 bp
lnc-SLC39A11-10:24 chr17:72071042-72119493 340 bp
lnc-SLC39A11-10:25 chr17:72081188-72119458 503 bp
lnc-SLC39A11-10:26 chr17:72071049-72119450 467 bp
lnc-SLC39A11-10:27 chr17:72071043-72119448 468 bp
lnc-SLC39A11-10:28 chr17:72071049-72118298 510 bp
lnc-SLC39A11-10:29 chr17:72071043-72116016 3032 bp
lnc-SLC39A11-10:3 chr17:72141386-72220718 577 bp
lnc-SLC39A11-10:30 chr17:72071042-72116016 3033 bp
lnc-SLC39A11-10:31 chr17:72040714-72111703 821 bp
lnc-SLC39A11-10:32 chr17:72110178-72110724 394 bp
lnc-SLC39A11-10:33 chr17:72090821-72110548 443 bp
lnc-SLC39A11-10:34 chr17:72090819-72110548 445 bp
lnc-SLC39A11-10:35 chr17:72104853-72110479 483 bp
lnc-SLC39A11-10:36 chr17:72081912-72089120 435 bp
lnc-SLC39A11-10:37 chr17:72081921-72089120 426 bp
lnc-SLC39A11-10:38 chr17:72076486-72085501 1001 bp
lnc-SLC39A11-10:39 chr17:72076106-72085089 972 bp
lnc-SLC39A11-10:4 chr17:72131775-72176984 298 bp
lnc-SLC39A11-10:40 chr17:72071049-72084081 480 bp
lnc-SLC39A11-10:41 chr17:72040647-72057734 576 bp
lnc-SLC39A11-10:42 chr17:72034107-72057734 582 bp
lnc-SLC39A11-10:43 chr17:72037314-72057734 650 bp
lnc-SLC39A11-10:44 chr17:72040647-72057734 576 bp
lnc-SLC39A11-10:45 chr17:72034107-72057730 578 bp
lnc-SLC39A11-10:46 chr17:72037314-72057719 635 bp
lnc-SLC39A11-10:47 chr17:72040809-72046347 961 bp
lnc-SLC39A11-10:48 chr17:72031426-72040212 5836 bp
lnc-SLC39A11-10:49 chr17:72021853-72037376 886 bp
lnc-SLC39A11-10:5 chr17:72172712-72176972 247 bp
lnc-SLC39A11-10:50 chr17:72025898-72035869 2051 bp
lnc-SLC39A11-10:51 chr17:72021851-72034092 323 bp
lnc-SLC39A11-10:52 chr17:72021851-72025997 381 bp
lnc-SLC39A11-10:53 chr17:72021851-72025979 363 bp
lnc-SLC39A11-10:54 chr17:72021851-72025962 346 bp
lnc-SLC39A11-10:6 chr17:72167387-72176969 218 bp
lnc-SLC39A11-10:7 chr17:72040732-72173583 733 bp
lnc-SLC39A11-10:8 chr17:72090459-72141780 742 bp
lnc-SLC39A11-10:9 chr17:72071055-72120805 520 bp


Locus conservation

Locus conservation?
lnc-SLC39A11-10 no no no no

Available literature

  1. Barter (2017), The long non-coding RNA <i>ROCR</i> contributes to SOX9 expression and chondrogenic differentiation of human mesenchymal stem cells., Development
  2. Su (2014), Comprehensive analysis of long non-coding RNAs in human breast cancer clinical subtypes., Oncotarget